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smartscribe 5× first strand buffer  (TaKaRa)


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    Structured Review

    TaKaRa smartscribe 5× first strand buffer
    Smartscribe 5× First Strand Buffer, supplied by TaKaRa, used in various techniques. Bioz Stars score: 96/100, based on 1136 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/5%C3%97+reverse-transcriptase+buffer/SMARTScribe+Reverse+Transcriptase/pmc09901934-194-8-12
    Average 96 stars, based on 1136 article reviews
    smartscribe 5× first strand buffer - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    Concentration Assay:

    Article Title: A bispecific antibody designed to act as a NRP2/PLXNA1 agonist mimics anti-cancer activity of SEMA3F.
    Article Snippet: .. A 6.79 μL reaction mixture was prepared, containing a final concentration of 1 mM dNTPs, 2 mM DTT, 1x first-strand buffer, 5 U/μL SMARTScribeTM Reverse Transcriptase (TaKaRa, Cat# 639538), and 1 μM template-switching oligo (TSO: AAGCAGTGGTATCAACGCAGAGTACGCrGrGrG). ..

    Article Title: A bispecific antibody designed to act as a NRP2/PLXNA1 agonist mimics anticancer activity of SEMA3F
    Article Snippet: .. A 6.79 μl reaction mixture was prepared, containing a final concentration of 1 mM dNTPs, 2 mM DTT, 1x first-strand buffer, 5 U/μl SMARTScribe Reverse Transcriptase (TaKaRa, Cat# 639538), and 1 μM TSO (AAGCAGTGGTATCAACGCAGAGTACGCrGrGrG). ..

    Reverse Transcription:

    Article Title: A bispecific antibody designed to act as a NRP2/PLXNA1 agonist mimics anti-cancer activity of SEMA3F.
    Article Snippet: .. A 6.79 μL reaction mixture was prepared, containing a final concentration of 1 mM dNTPs, 2 mM DTT, 1x first-strand buffer, 5 U/μL SMARTScribeTM Reverse Transcriptase (TaKaRa, Cat# 639538), and 1 μM template-switching oligo (TSO: AAGCAGTGGTATCAACGCAGAGTACGCrGrGrG). ..

    Article Title: Drought Stress Inhibits the Accumulation of Rotenoids and the Biosynthesis of Drought-Responsive Phytohormones in Mirabilis himalaica (Edgew.) Heim Calli
    Article Snippet: .. Subsequently, 4 μL of 5× Reverse Transcriptase M-MLV Buffer (Takara, Japan) was added to the solution obtained in the preceding step. .. A total of 1 μL of Recombinant RNase inhibitor (Takara, Japan), 2 μL of dNTP (Takara, Japan) and 1 μL of Reverse Transcriptase M-MLV (RNase H-) (Takara, Japan) were reacted at 42 °C for 60 min and held at 70 °C for 15 min.

    Article Title: scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples.
    Article Snippet: The reaction mixture (11.25μL), containing 500ng-1 μg of RNA, 1μL of 100μM FirstStrand_cDNA oligo, and 0.25μL of RNase Inhibitor (20U/μL, ThermoFisher Scientific, cat. no. N8080119), is heated at 70 °C for 3min, then immediately cooled on ice. .. Next, the master mix is added, which consists of: • 4μL of 5× First-Strand Buffer (from SMARTMMLV kit (Takara, cat. no. 639524)) • 2μL of dNTP Mix (Thermo Fisher Scientific, cat. no. R0192) • 2μL of 100mM DTT (from SMART MMLV kit (Takara, cat. no. 639524)) • 0.25μL of RNase Inhibitor (20 U/μL) (Thermo Fisher Scientific, cat. no. N8080119) • 0.5μL SMART MMLV Reverse Transcriptase (from SMARTMMLV kit (Takara, cat. no. 639524)) The reaction is gently mixed and incubated at 42 °C for 60min and then at 70 °C for 15min. .. Next, 2.2μL of 10× RNase H buffer and 0.2μL of RNase H (5 U/μL, Thermo Fisher Scientific, cat. no. EN0201) are added to each reaction and incubated at 37 °C for 20min.

    Article Title: scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
    Article Snippet: The reaction mixture (11.25 μL), containing 500ng-1 μg of RNA, 1 μL of 100 μM FirstStrand_cDNA oligo, and 0.25 μL of RNase Inhibitor (20 U/μL, Thermo Fisher Scientific, cat. no. N8080119), is heated at 70 °C for 3 min, then immediately cooled on ice. .. Next, the master mix is added, which consists of: 4 μL of 5× First-Strand Buffer (from SMART MMLV kit (Takara, cat. no. 639524)) 2 μL of dNTP Mix (Thermo Fisher Scientific, cat. no. R0192) 2 μL of 100 mM DTT (from SMART MMLV kit (Takara, cat. no. 639524)) 0.25 μL of RNase Inhibitor (20 U/μL) (Thermo Fisher Scientific, cat. no. N8080119) 0.5 μL SMART MMLV Reverse Transcriptase (from SMART MMLV kit (Takara, cat. no. 639524)) The reaction is gently mixed and incubated at 42 °C for 60 min and then at 70 °C for 15 min. Next, 2.2 μL of 10× RNase H buffer and 0.2 μL of RNase H (5 U/μL, Thermo Fisher Scientific, cat. no. EN0201) are added to each reaction and incubated at 37 °C for 20 min. .. The RNAClean XP beads (Beckman Coulter, cat. no. A63987) are used (with 1.8x) to purify the cDNA reaction mixture, and the cDNA is eluted in 20 μL of Qiagen Elution Buffer.

    Article Title: Gene expression QTL mapping in stimulated iPSC-derived macrophages provides insights into common complex diseases
    Article Snippet: Using the automated Zephyr G3 NGS Workstation (Perkin Elmer), mRNA was purified from the cell lysates in 96 well plates using the mRNA DIRECT kit (Thermo Fisher, 61012), according to the manufacturer’s instructions, using 20 μL of oligo dT Dynabeads. .. 5 μL of 5x SMARTScribe first-strand buffer (Clontech Takara, 639538), 0.63 μL of SUPERase inhibitor (Thermo Fisher, AM2696), 1.25 μL of 100 mM 1,4- dithiothreitol, 5 μL of betaine (Sigma, B0300-5VL), 0.15 μL of 1 M MgCl2, 0.38 μL of template-switching LNA-oligo (TSO) (Qiagen) and 1.25 μL of SMARTScribe reverse transcriptase (Clontech Takara, 639538) were added to the denatured mRNA/dNTP/oligo dT30VN mix. .. For the modified Smart-seq2 method 65), the purified mRNA was processed as follows : 2 μL of oligo dT30VN (Integrated DNA Technologies) and 2.34 μL of 10 mM dNTPs (Thermo Fisher, R0193) were mixed with 7 μL of the purified mRNA and heated to 72 °C for 3 minutes to denature secondary structures, before rapidly chilling on ice for 5 minutes.

    Article Title: A bispecific antibody designed to act as a NRP2/PLXNA1 agonist mimics anticancer activity of SEMA3F
    Article Snippet: .. A 6.79 μl reaction mixture was prepared, containing a final concentration of 1 mM dNTPs, 2 mM DTT, 1x first-strand buffer, 5 U/μl SMARTScribe Reverse Transcriptase (TaKaRa, Cat# 639538), and 1 μM TSO (AAGCAGTGGTATCAACGCAGAGTACGCrGrGrG). ..

    other:

    Article Title: Barcoding of small extracellular vesicles with CRISPR-gRNA enables comprehensive, subpopulation-specific analysis of their biogenesis and release regulators.
    Article Snippet: Five μL of RNA wasmixed with 0.5 μL of oKK145 [12 μM], incubated at 70 °C for 3min, put on ice to form RNA/primer complex and mixed with 4.5 μL of RT solution {0.5 μL of SMARTScribe RTase (cat. #639536, Takara), 2 μL of 5x first strand buffer (supplied with RTase), 0.25 μL of DTT (supplied with RTase), 1 μL of dNTPs (cat. #N0447, NEB), 0.5 μL of custom LNA-TSO [12 μM] (cat. # 339412, Qiagen) and 0.25 μl of RNase inhibitor (cat. #2313A, Takara)}.

    Article Title: Barcoding of small extracellular vesicles with CRISPR-gRNA enables comprehensive, subpopulation-specific analysis of their biogenesis and release regulators
    Article Snippet: Five μL of RNA was mixed with 0.5 μL of oKK145 [12 μM], incubated at 70 °C for 3 min, put on ice to form RNA/primer complex and mixed with 4.5 μL of RT solution {0.5 μL of SMARTScribe RTase (cat. #639536, Takara), 2 μL of 5x first strand buffer (supplied with RTase), 0.25 μL of DTT (supplied with RTase), 1 μL of dNTPs (cat. #N0447, NEB), 0.5 μL of custom LNA-TSO [12 μM] (cat. # 339412, Qiagen) and 0.25 μl of RNase inhibitor (cat. #2313A, Takara)}.

    Incubation:

    Article Title: scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples.
    Article Snippet: The reaction mixture (11.25μL), containing 500ng-1 μg of RNA, 1μL of 100μM FirstStrand_cDNA oligo, and 0.25μL of RNase Inhibitor (20U/μL, ThermoFisher Scientific, cat. no. N8080119), is heated at 70 °C for 3min, then immediately cooled on ice. .. Next, the master mix is added, which consists of: • 4μL of 5× First-Strand Buffer (from SMARTMMLV kit (Takara, cat. no. 639524)) • 2μL of dNTP Mix (Thermo Fisher Scientific, cat. no. R0192) • 2μL of 100mM DTT (from SMART MMLV kit (Takara, cat. no. 639524)) • 0.25μL of RNase Inhibitor (20 U/μL) (Thermo Fisher Scientific, cat. no. N8080119) • 0.5μL SMART MMLV Reverse Transcriptase (from SMARTMMLV kit (Takara, cat. no. 639524)) The reaction is gently mixed and incubated at 42 °C for 60min and then at 70 °C for 15min. .. Next, 2.2μL of 10× RNase H buffer and 0.2μL of RNase H (5 U/μL, Thermo Fisher Scientific, cat. no. EN0201) are added to each reaction and incubated at 37 °C for 20min.

    Article Title: scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
    Article Snippet: The reaction mixture (11.25 μL), containing 500ng-1 μg of RNA, 1 μL of 100 μM FirstStrand_cDNA oligo, and 0.25 μL of RNase Inhibitor (20 U/μL, Thermo Fisher Scientific, cat. no. N8080119), is heated at 70 °C for 3 min, then immediately cooled on ice. .. Next, the master mix is added, which consists of: 4 μL of 5× First-Strand Buffer (from SMART MMLV kit (Takara, cat. no. 639524)) 2 μL of dNTP Mix (Thermo Fisher Scientific, cat. no. R0192) 2 μL of 100 mM DTT (from SMART MMLV kit (Takara, cat. no. 639524)) 0.25 μL of RNase Inhibitor (20 U/μL) (Thermo Fisher Scientific, cat. no. N8080119) 0.5 μL SMART MMLV Reverse Transcriptase (from SMART MMLV kit (Takara, cat. no. 639524)) The reaction is gently mixed and incubated at 42 °C for 60 min and then at 70 °C for 15 min. Next, 2.2 μL of 10× RNase H buffer and 0.2 μL of RNase H (5 U/μL, Thermo Fisher Scientific, cat. no. EN0201) are added to each reaction and incubated at 37 °C for 20 min. .. The RNAClean XP beads (Beckman Coulter, cat. no. A63987) are used (with 1.8x) to purify the cDNA reaction mixture, and the cDNA is eluted in 20 μL of Qiagen Elution Buffer.



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    Image Search Results


    Journal: iScience

    Article Title: Time course transcriptomic profiling suggests Crp/Fnr transcriptional regulation of nosZ gene in a N 2 O-reducing thermophile

    doi: 10.1016/j.isci.2024.111074

    Figure Lengend Snippet:

    Article Snippet: Maxima H Minus Reverse Transcriptase (200U/μL) with 5×RT Buffer , ThermoFisher , Cat# EP0751.

    Techniques: Virus, Recombinant, Reverse Transcription, Isolation, Control, Sequencing, Mass Spectrometry, Software, In Silico, Targeted Proteomics